Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----MNFKVFLLAASTIAVGLVELIVGGILPQIANDL--------DISIVSAGQLISVFALGYAVSGPLLLALTAKIERKRLYLIALFVFFLSNLVA------------------YFSPNFATLMVSRVLAAMSTGLIVVLSLTIAPKIVAPEYRARAIGIIFMGFSSAIALGVPLGILISDS--------FGWRILFLGIGLLALISMLIISI-------------------FFERIP-----AEKMIPFREQLKTIGNLK----------IASSHLVTMFTLAGHYTLYAYFAPFLEETLHLSSFWVSICYFLFGISAVCGGPFGGALSDRLG----SFKSILLVTGSFAIIMFLLPLSTSSMIFFLPVMVIWGLLSWSLAPAQQSYLIEIAPDSSDIQQSFNTSALQVGIALGSAIGGVVLDQTGTVVSTAWCGGSIVIIAV--LFAFISLTRPVQTAKKSSL--------
4GC0 Chain:A ((5-479))YNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE


General information:
TITO was launched using:
RESULT:

Template: 4GC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2028 -329159 -162.31 -848.35
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -162.31
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.344

(partial model without unconserved sides chains):
PDB file : Tito_4GC0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GC0-query.scw
PDB file : Tito_Scwrl_4GC0.pdb: