Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTFIKRLEDAYETLLGNYPAGVSSTSTSKYNEIRKIVSEAFLIGENEVYVTGTSRRISNLDTRFAQGNQRNKHTRMAVAFISIPSVDDSELDELIIRTRNSAITTSSKFCNGEERGTIFDGILLFLVFEGETKVYPLA------FLVFE--NDFELKEKAEELIP--GIEL-KEYPRANQSPAQENNKSAKNE------DEESAKSYVV-------FLDIEEDGSIVEFVEDKDKTYRIG-DMIWTASHTNGSSAITRRLEVIEVVENLVVCKIKHKYNEPVDKNSLLKFVNIEQDLISFLDLHPNVQNGSEGFVSGDIVDENATTSSDDLPEDFENN--------------------------------------
4A9A Chain:B ((2-369))STTVEKIKAIEDEMAR--------TQKNKATSFHLGQLKAKLAKLRRELLTSASSGSGGGA---GIGFDVARTGVASVGFVGFPSVGKSTLLSKLTGT-ESETTLVTVPGVIRYKGAKIQMLDLPGIIDGGKQVIAVARTCNLLFIILDVNKPLHHKQIIEKELEGVGIRLNKTPPDILIKKKEKGGISITNTVPLTHLGNDEIRAVMSEYRINSAEIAFRCDATVDDLIDVLEASSRRYMPAIYVLNKIDSLS--IEELELLYRIPNAVPISSGQDWNLDELLQVMWDRLN-------LVRIYTKPKGQIPDFTDPVVLRSDRCSVKDFCNQIHKSLVDDFRNALVYGSSVKHQPQYVGLSHILEDEDVVTILKK


General information:
TITO was launched using:
RESULT:

Template: 4A9A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1141 -97501 -85.45 -333.91
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -85.45
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.285

(partial model without unconserved sides chains):
PDB file : Tito_4A9A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4A9A-query.scw
PDB file : Tito_Scwrl_4A9A.pdb: