Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MTKKRITFGLLVLMVCVILFVLYVQLRNK--DSIPVQSSAIHPEEDRIFFIYSNPFIKESVLLSTSTGERFNRRTFKVADVPYIQTKSYASTDLVLLAEHEPFYYTLE-KDVIKEHPLSDPFAFW--YEGKDVTI----EAYNVDTTGNEIHINDRKTKKEYTLTLPPLVTMGASDENFIYIIQSMSIYVIDRKTEEMIETLSLASYADQFADSEEFIVASSDHKLTVIEKGTWKTTYIAYPEDLEYADTVYYDKESGSFYVAYEDKEGGANLLEYGEDFSIHTYSLKFP---------YMEAKFKGNLLYIVAQEEHKKGIGGYVGVFDIHSKEMLYQFDLPEEQVKVQDF-------VVVDNK--------- 1BPO Chain:A ((1-330)) MAQIL-----------PIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPAS---KVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQ--PVKMFDRHSSLAGCQIINYRTDAKQKWLLL--TGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGN--------------AEESTLFCFAVRGQAGGKLHIIEVGTPPTGN-----QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY-------GYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE

General information: TITO was launched using: RESULT: Template: 1BPO.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1518 -149805 -98.69 -506.10 target 2D structure prediction score : 0.57 Monomeric hydrophicity matching model chain A : 0.65 3D Compatibility (PKB) : -98.69 2D Compatibility (Sec. Struct. Predict.) : 0.57 1D Compatibility (Hydrophobicity) : 0.65 QMean score : 0.290

(partial model without unconserved sides chains): PDB file : Tito_1BPO.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1BPO-query.scw PDB file : Tito_Scwrl_1BPO.pdb: