Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAFKIENETIADGF-----YACPAVYEDAESITGLLVRTAEWLRDRGSNQWSGLLKGQDIHDITGSIEKGHVFVFKKDE-ELAAVVMLLPAPSEWDRTLWGDDGHEESIYLHRLAVSRRFAGQGLGARVLQWAET-GIHFPEKTRIRLDCVADSDALHSFYRRMGYEFMGADASGYHLFEKEITAE
2OH1 Chain:A ((5-179))-------NKITAGGLEFLVRFAAPT---DRLKINDLMIDTARWLKESGSTQWSDILHGFDVHNIEQRIELGEVALFETEAGALAGAMIIRKTPSDWDTDLWEDLAIDKAYYLHRIMVSRAFSGISLSKQMIYFAEKLGIEMSVPF-IRLDCIESNETLNQMYVRYGFQFSGK-KNGFYLYQKELSQK


General information:
TITO was launched using:
RESULT:

Template: 2OH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 707 -95480 -135.05 -568.33
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -135.05
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.433

(partial model without unconserved sides chains):
PDB file : Tito_2OH1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OH1-query.scw
PDB file : Tito_Scwrl_2OH1.pdb: