Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELVRIFKEHNVFGWISVGTAVLSLLLLNL--------------AIISNVTFYSY------QMLPFAMAAVPFGVVELFIKRGRTGP-GLLGVILNLFVIICVYTIVSVDTNLQFGF
4N4D Chain:A ((29-118))---------NTVYGWIIVEIACIPILLLSLRRGLTAGLVGGLIWGILSMITGHAYILSLSQAFLEYLVAPVSLGIAGLF--RQKTAPLKLAPVLLGTFVAV----------------


General information:
TITO was launched using:
RESULT:

Template: 4N4D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 163 -32689 -200.54 -473.75
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -200.54
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.041

(partial model without unconserved sides chains):
PDB file : Tito_4N4D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4N4D-query.scw
PDB file : Tito_Scwrl_4N4D.pdb: