Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIVKEINPHFEDYVFNWEQTYQFLVGGYGSSKSYHTALKIVLKLLKEKRTALVIREVFDTHRDSTFALFQEVIEELGLTKAVASLSSPLQLRFHNGSRIMFKGM-DNPAKLKSVHNISLIWIEECSEVKYEGFKELIGRLRHPELKLHMICTTNPVGTSNWTYRHFFRDERKKRFVLDDSELYEKRTIVKGDTYYHHSTANDNLFLPESYVKQLDGLKEYDPDLYRIARKGRFGVNGIRVLPQFEVLPHDQVKKCIAAISKPIFRTGMDFGFEESYNAVVRLAVDPEKKYLYIYWEYYQNKMTDDRTAEELREFIETQELIKADSAEPKSIQYFRQQGFRMVGARKFPGSRLQYTKKVKRFKKIFCSDRCENVIYELETLTYAKDKNGALIEDEFTIDPHTLSAIWYALDDYEVADMKETAHKRMRPNRERRRS
4IDH Chain:A ((4-212))-----INPIFEPFIE--AHRYKVAKGGRGSGKSWAIARLLVEAARRQPVRILCARELQNSISDSVIRLLEDTIEREGYS-AEFEIQRSMIRHLGTNAEFMFYGIKNNPTKIKSLEGIDICWVEEAEAVTKESWDILIPTIRKPFSEIWV--SFNPKNILDDTY---------QRFVVNPPD----------DICLLTVNYTDNPHFPEVLRLEMEECKRRNPTLYR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4IDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 934 -102695 -109.95 -523.95
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -109.95
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.534

(partial model without unconserved sides chains):
PDB file : Tito_4IDH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IDH-query.scw
PDB file : Tito_Scwrl_4IDH.pdb: