Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIIVQKFGGTSVKDDKGRKLALGHIKEAISEGYKVVVVVSAMGRKGDPYATDSLLGLLYGDQSAISP----REQDLLLSCGETISSVVFTSMLLDNGVKAAALTGAQAGFLTNDQHTNAKIIEMKPERLFSVLANHDAVVVAGFQGAT-EKGDTTTIGRGGSDTSAAALGAAVDAEYIDIFTDVEGVMTADPRVVENAKPLPVVTYTEICNLAYQGAKVISPRAVEIAMQAKVPIRVRSTYSNDKGTLVTSHHSSKVGSDVFERLITGIAHVKD---VTQFKVPAKIGQYNVQTEVFKAMANAGISVDFF--NITPSE-----IVYTVAGNKTETAQRILMDMG---------YDPMVTRNCAKVSAVGAGIMGVPGVTSKIVSALSEKEIPILQSADSHTTIWVLVHEADMVPAVNALHEVFELSK
3AAW Chain:C ((1-407))MALVVQKYGGSSLESAERIRNVAERIVATKKAGNDVVVVCSAMGD-----TTDELLEL----AAAVNPVPPAREMDMLLTAGERISNALVAMAIESLGAEAQSFTGSQ---------------DVTPGRVREALDEGKICIVAGFQGVNK--RDVTTLGRGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAVGSKILVLRSVEYARAFNVPLRVRSSYSNDPGTLIAGSMED---IPVEEAVLTGVATDKSEAKVTVLGISDKPGE---AAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRSDGRRAMEILKKLQVQGNWTNVLYDDQV----GKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTSEIRISVLIREDDLDAAARALHEQFQL--


General information:
TITO was launched using:
RESULT:

Template: 3AAW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1924 -270741 -140.72 -739.73
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain C : 0.78

3D Compatibility (PKB) : -140.72
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.528

(partial model without unconserved sides chains):
PDB file : Tito_3AAW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AAW-query.scw
PDB file : Tito_Scwrl_3AAW.pdb: