Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTNKRVLILTANYGNGHVQVAKTLYEQCVRLGFQHVTVSNLYQESNPIVSEVTQYLYLKSFSIGKQFYRLFYYGVDKIYNKRKFNIYFKMGNKRLGELVDEHQPDIIINTFP-MIVVPEYRRRTGRVIPTFNVMTDFC----LHKIWVHENVDKYYVATDYVKEKLLEIGTHPSNVKITGIPIRPQFEES-MPVGPIYKKYNLSPNKKVLLIMAGAHG---VLKNVKELCENLVKDDQ----VQVVVVCGKNTALKESLSALEAENGDKLKVLGYVERIDELFRITDCMITKPGGITLTEATAIGVPVILYKPVPGQEKENANFFEDRGAAIVVNRHEEILESVTSLLA-DEDTLHRMKKNIKDLHLANSSEVILEDILKESEMMTAKQKAKVLS
4X1T Chain:A ((6-389))----KKVLILMSDTGGGH----------------------------------------RASAEAIRAAFNQEF--------GDEYQVFIT-------------QPDIIISVHPLMQHVPLRVLRSKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPSTEVAKRAQKAGLETSQIKVYGLPVRPSFVKPVRPKVELRRELGMDENLPAVLLMGGGEGMGPIEATARALADALYDKNLGEAVGQVLIICGRNKKLQSKLSSLDWKI--PVQVKGFITKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVENGCGKFSKSPKEISKIVADWFGPASKELEIMSQNALRLAKPEAVFKIVHDMHELVRKKNS--------


General information:
TITO was launched using:
RESULT:

Template: 4X1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1766 -19349 -10.96 -63.03
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -10.96
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_4X1T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4X1T-query.scw
PDB file : Tito_Scwrl_4X1T.pdb: