Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE
1NQU Chain:B ((1-153))MQIYEGKLTAEGLRFGIVASRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVPGSWEIPVAAGELARKEDIDAVIAIGVLIRGATPHFDYIASEVSKGLANLSLELRKPITFGVITADTLEQAIERAGTKHGNKGWEAALSAIEMANLFKSL-


General information:
TITO was launched using:
RESULT:

Template: 1NQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 823 -116499 -141.55 -761.43
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain B : 0.89

3D Compatibility (PKB) : -141.55
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.563

(partial model without unconserved sides chains):
PDB file : Tito_1NQU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NQU-query.scw
PDB file : Tito_Scwrl_1NQU.pdb: