Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEPLKSHTGKAAVLNRINVDTDQIIPKQFLKRIERTGYGRFAFFDWRY-DANGEPNPEFELNQPVYQGASILIAGENFGCGSSREHAPWALDDYGFKIIIAPSFADIFHQNCFKNGMLPIRMPYDNWKQLVGQYENQSLQMTVDLENQLIHDSEGNQISFEVDPHWKEMLINGYDEISLTLLLEDEIKQFESQRSSWLQA
2HCU Chain:A ((18-189))MEEFTIYTGTTVPLMNDNIDTDQILPKQFLKLIDKKGFGKYLMYEWRYLDNNYTENPDFIFNQPEYREASILITGDNFGAGSSREHAAWALADYGFKVIVAGSFGDIHYNNDLNNGILPIIQPKEVRDKLAKL--KPTDEVTVNLFEQKIYSPVGD-FSFDIDGEWKHKLLNGLD-------------------------


General information:
TITO was launched using:
RESULT:

Template: 2HCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 871 -20192 -23.18 -118.08
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -23.18
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.626

(partial model without unconserved sides chains):
PDB file : Tito_2HCU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HCU-query.scw
PDB file : Tito_Scwrl_2HCU.pdb: