Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLAVNFTAFFYNLNISNLTRQVNKMKMDELEKVMIVEGKSDKEKIESVLNEPMRIICTNGTISQLRLEELADELYDKDVYILVDADESGEKLRKQLKREFNEACHLHVDRAYKEVAAAPRHHIASVLLRANLNVHTIFLERKSRGV
2FCJ Chain:B ((2-118))---------------------------RRVEKVIIVEGRSDKQKVAAVLNEPVVIVCTNGTISDARLEELADELEGYDVYLLADADEAGEKLRRQFRRMFPEAEHLYIDRAYREVAAAPIWHLAQVLLRARFDVRIESLMR-GRG-


General information:
TITO was launched using:
RESULT:

Template: 2FCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 514 -81837 -159.22 -699.46
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -159.22
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.625

(partial model without unconserved sides chains):
PDB file : Tito_2FCJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FCJ-query.scw
PDB file : Tito_Scwrl_2FCJ.pdb: