Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIMLFLAMTSILSACQPNYTGKYIEIGDTLTDYTKECFKENEIPYKYEKGKLYIPEDAFDTAIYTCS
4MRD Chain:A ((77-106))----------------CAANHTGVYILVTSNTSHYDTYCFNASAPP-----------------------


General information:
TITO was launched using:
RESULT:

Template: 4MRD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 11 -1853 -168.45 -61.77
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : -168.45
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.414

(partial model without unconserved sides chains):
PDB file : Tito_4MRD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MRD-query.scw
PDB file : Tito_Scwrl_4MRD.pdb: