Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKVRTKDVMEQFNLELISGEEGINRPITMSDLSRPGIEIAGYFTYYPRERVQLLGKTELSFFEQLPEEEKKQRMDSLCTDVTPAIILSRDMPIPQELIDASEKNGVPVLRSPLKTTRLSSRLTNFLESRLAPTTAIHGVLVDIYGVGVLITGKSGVGKSETALELVKRGHRLVADDCVEIRQEDQDTLVGNAPELIEHLLEIRGLGIINVMTLFGAGAVRSNKRITIVMNLELWEQGKQYDRLGLEEETMKIIDTEITKLTIPVRPGRNLAVIIEVAAMNFRLKRMGLNAAEQFTNKLADVIEDGEQEE
1KO7 Chain:A ((1-298))--MLTTKSLVERFELEMIAGEAGLNKQIKNTDISRPGLEMAGYFSHYASDRIQLLGTTELSFYNLLPDEERKGRMRKLCRPETPAIIVTRDLEPPEELIEAAKEHETPLITSKIATTQLMSRLTTFLEHELARTTSLHGVLVDVYGVGVLITGDSGIGKSETALELIKRGHRLVADDNVEIREISKDELIGRAPKLIEHLLEIRGLGIINVMTLFGAGSILTEKRLRLNIHLE-------------NEETLRILDTEITKKTIPVRPGRNVAVIIEVAAMNYRLNIMGINTAEEFNDRLN----------


General information:
TITO was launched using:
RESULT:

Template: 1KO7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1401 -160305 -114.42 -562.47
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.89

3D Compatibility (PKB) : -114.42
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.607

(partial model without unconserved sides chains):
PDB file : Tito_1KO7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KO7-query.scw
PDB file : Tito_Scwrl_1KO7.pdb: