Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDGEQSQPPAQEDAEDDSRPDAAEAAA------------------AEPKSSAGPMFSTYGIASTLLGVLSV-------------------------------------------AAVVLGAMIWSAHRDDSGERTY-LTRVMLTAAEWTAVLINMNAD-NIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIE--AVAIDTVH---RELDTQSGAARPVVTTKLPPFAT---RTDSVLLVATSVSENAGA-----------KPQTVHWNLRLDV-------SDVDGKLMISRLESIR---------- |
4N5H Chain:X ((1-315)) | MADEEAMLAKVQASWAQTAARDKARYADERVPEDVHWETEYRYEQSADPQQTLNLYYPAKRRNATMPTVIDIHGGGWFYGDRNLNRNYCRYLASQGYAVMGMGYRLLPDVDLRGQIQDIFASLRWLSHF--GPQRGFDLDHVLLTGDSAGGHLASLVACIQQSAELQELFGVSRVNFNFTLVALVCPVAE-PSKLPEAAGDMSDMAAFYLDKLSGGDQALVDHLNFSQVVKGLDLPPFMLIGGQNDSFYLQSQALLKVFDANHVTYTTKLWPASAGPHLKHVFNVQHWEWPESIETNLEMLRTFDALSKQQDQAEENE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4N5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -29159 for 1474 contacts (-19.8/contact) +
2D Compatibility (PS) -22726 + (NN) -3655 + (LL) 40
1D Compatibility (HY) -10400 + (ID) 2300
Total energy: -68200.0 ( -46.27 by residue)
QMean score : 0.207
|
|
|