Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------------------------MAVTDVFARRATLRRSLRLLADFRYEQRDPARFYRTL---------AADTAAMIGDLWLATHSEPPVGRTLLDVGGGPGYFATAFSDA-GVGYIGVEPDPDEMHAAGPAFTGRPG---MFVRASGMALPFADDSVDICLSSNVAEHVPRPWQLGTEMLRVTKPGGLVVLSYTV-----WLGPFGGHEMGLSHYLGGARAAARYVRKHG--HPAKNNYGSSLFAVSAAEGLRWAAGTGAALAVF--PRYHPRWAWWLTSVPVLREFLVSNLVLVLTP-- |
| 4KRI Chain:C ((1-433)) | ASMPAVERQLIECLHHVIKGAEPQQVGILCPQDDQRKALTEQFGSKTATSFCKEVDSLKNLSNLDALIVNQALDEEINDSEKLDKFITAALRSLRTDGVLILRQDLSKVKEMKKMAMLTDYFDVFRLEEGNGNVGFQFYAVNEVLDSVYVHQNWLDFIWTLMKKPFPVSFRDFLDRTQYTDTGIFAYEWIFGNNFISPGGWNQNLAILKRF-----GPMKTGQRMLDIGVGIGGGARQAASEFGLQVHGVDLSTNMLAVALERVHKEKDARVTYAVCDACEYEFEPNSFDYVFSRDCIQHIKDTDKLFSRIYRALKPGGKVLITMYGVGHGTLSESFKEYVSQRQYYLKNLEQIEEIAKKTGFIDIEVENMTPRFKEILLEERERIEQDKETFLAKFSQNAYDGLVSGWKSKLQYIADDNHNWNFFAAVKPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KRI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90177 for 1881 contacts (-47.9/contact) +
2D Compatibility (PS) -27083 + (NN) -9886 + (LL) 572
1D Compatibility (HY) -9600 + (ID) 1950
Total energy: -138124.0 ( -73.43 by residue)
QMean score : 0.263
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