Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPELNTARGPIDTADLGVTLMHEHVFIMTTEIAQNYPEAWGDEDKRVAGAIARLGELKARGVDTIVDLTVIGLGRYIPRIARVAAATELNIVVATGLYTYNDVPFYFHYLGPGAQLDGPEIMTDMFVRDIEHGIADTGIKAGILKCATDEPGLTPGVERVLRAVAQAHKRTGAPISTHTHAGLRRGLDQQRIFAEEGVDLSRVVIGHCGDSTDVGYLEELIAAGSYLGMDRF--------------GVDVISPFQDRVNIVARMCERGHADKMVLSHDACCYFDALPEELVPV---AMPNWHYLHIHNDVIPALKQHGVTDEQLHTMLVDNPRRIFERQGGYQ |
| 4XAF Chain:A ((4-327)) | --RINTVRGPITISEAGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDLGRDVSLLAEVSRAADVHIVAATGLWL--DPPLSM-------RLRSVEELTQFFLREIQYGIEDTGIRAGII-VATTGK-VTPFQELVLRAAARASLATGVPVTTHTAASQRGGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDRIPHSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDSVNPD-GMAFIPLRVIPFLREKGIPQETLAGITVTNPARFLS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XAF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -248708 for 2759 contacts (-90.1/contact) +
2D Compatibility (PS) -32550 + (NN) -9908 + (LL) 188
1D Compatibility (HY) -23600 + (ID) 5750
Total energy: -320328.0 ( -116.10 by residue)
QMean score : 0.638
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