Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------MNRIVAPAAASVVVGLLLGAAAIFGVTLMVQQDKKPPLPGGDPSSSVLNRVEYGNRS-----
4UZZ Chain:B ((538-602))
ASDEFASEKVRLAQLTNKCNNNDLDYYIKESGDILGVT--------DKVKNKHDAKAILRYVLEELINFKKLN
General information:
TITO was launched using:
RESULT:
Template:
4UZZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20955 for 285 contacts (-73.5/contact) +
2D Compatibility (PS) -5294 + (NN) -4908 + (LL) 868
1D Compatibility (HY) -2800 + (ID) 300
Total energy: -33389.0 ( -117.15 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_4UZZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UZZ-query.scw
PDB file :
Tito_Scwrl_4UZZ.pdb
: