Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSIDTNILLYAQNRDCPEHDAAAAFLVECAGRADVAVCELVLMELYQLLRNPTVVTRPLEGPEAAEVCQTFRRNRRWA-LLENAPVMNEVWVLAATPRI--ARRRLFDARLALTLRHHGVDEFATRNINGFTDFGFSRVWDPITSDG
5ECD Chain:A ((9-137))
KFMLDTNICIFTIKNKPAS---VRERFNL--NQGKMCISSVTLMELIYGAEKSQM------PERNLAVIEGFVSR--IDVLDYDAAAATHTGQIRAELARQGRPVGPFNQMIAGHARSRGL-IIVTNNTREFERVGGLRTEDW-----
General information:
TITO was launched using:
RESULT:
Template:
5ECD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86258 for 974 contacts (-88.6/contact) +
2D Compatibility (PS) -13859 + (NN) -9467 + (LL) 900
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: -111834.0 ( -114.82 by residue)
QMean score : 0.336
(partial model without unconserved sides chains):
PDB file :
Tito_5ECD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5ECD-query.scw
PDB file :
Tito_Scwrl_5ECD.pdb
: