Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MAKTSHRVSSADG--MSKRILRLIIAQSGFYSAALQLGNVSIVLPFVVAELDAELWIAALIFPAFTAGGAIGNVVAPPAVAAVPRRHRLFIIVSCLAVLAGVNALCATIGKGSVAGILLVVNVTLIGVVSAISFVAFADLVAAMPSGTARARILLTEVGVGAALTAVVAATLSFVPDQHPLSRNIHLLWTAAVAMAI------------------SAAICRALP-HRIVPRVHAAPGLHKLVYVGWTAIRTNGW-----YRRYLLVQVLFGSVVLGSSFHSIRVAAVPGDQPDEVVAVVLFVCVGLLGG--IALWNRVRERFGLVGLFVGSALVSIAAAVLSIAFDLAGAW-PNVVAIGLVIALVSIANQSVFTAGQLWIARDAEPGLRTSLISFGQLVINAGLVGMGLALGLIAQDHDAVWPVMIVLLLNLTAAYSATRFAPAKSVDVRGLPQVSRTSRPKTGG--------------------- |
| 3WDO Chain:A ((3-455)) | DYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGAS----------------EALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAAL--SDSIWGIILGRALQGSGAIAAAVMALLSDLTREQNR-TKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRK-----MKQVFVFCVGLIVVAEIVLWNAQTQ----------FWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEP--PYVSSLRIEIPADIAANEALKVRLLETEGVKEVLIAEEEHSAYVKIDSKVTNRFEVEQAIRQAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -300813 for 3341 contacts (-90.0/contact) +
2D Compatibility (PS) -41412 + (NN) -8160 + (LL) 3072
1D Compatibility (HY) -19600 + (ID) 4300
Total energy: -371213.0 ( -111.11 by residue)
QMean score : 0.187
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