Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDE--RGASWVAGGMLAPHSEGWPGEERLLRLGLQSLRLWREGSF--LDGLGP-QLVTAHESLVVAVDRADVADLRTVADWLSAQGHPVIWE--SAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSS--QVSSL-------------SDVDAHTVVIANGIDAPALWP----GLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDG-VVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLD--SRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS |
| 4YSH Chain:A ((3-353)) | -----HRYDVAIVGGGVIGAAIGFELAKRRHRVAIFEKGTMGSGASSAAAGMLGAQSEFST-SSPLVPLALQSRALMPALAEELRERTGIDIGLVEKGLIKLATTEEEADDLYRHYTFWRGIGEPVQWLTKGEALEMEPRLAEALAGAMYIPGDGQVSAPDLAAALAYAAASAGACLYEYTEVFDIRSDSSGHVLDTTGGTFAAEAVVIASGAWAARLGARVGLSLSVYPVKGECVMVRAPVPLL--QTTVF----AKNGCYIVPKSGNRLLIGATSTPGTFDRRVSAGGVMNLLHRAAHLVPDIEQAEWVASWSGIRPQTEDGLPYLGEHPERRGLFVAAGHYRNGILLSPLTGLLVADLVE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222060 for 2849 contacts (-77.9/contact) +
2D Compatibility (PS) -34591 + (NN) -10463 + (LL) 1076
1D Compatibility (HY) -16000 + (ID) 4700
Total energy: -286738.0 ( -100.65 by residue)
QMean score : 0.478
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