Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVDDSADVVVVGAGPAGSAAAAWAARAGRDVLVIDTATFPRDKPCGDGLTPRAVAELHQLG-LGKWLADHIRHR-GLRMS----------GFGG------EVEVDWPGPSFPSYGSAVA----RLELDDRIRKVAEDTGARMLLGAKAVAVHHDSSRRV-VSLTL-ADGTEVGCRQLIVADGARSPLGRKLGRRWHRETVYGVAVRGYLS----TAYSDDPWLTSHLELRSPDGAVLPGYG---WIFPLGNGEVNIGVGALSTSRRPADLALRPLISYYTDLRRDEWGFTGQPRAVSSALLPMGGAVS--GVAGSNWMLIGDAAACVNPLNGEGIDYGLETGRLAAELLDSRDLARLWPSLLADRYGRGFSVARR-----LALLLTFPRFLPTTGPITMRSTALMNIAVRVMSNLVTDDDRDWVARVWRGGGQLSRLVDRRPPFS |
| 5DBJ Chain:D ((5-441)) | --SDHDYDVVIIGGGPAGSTMASYLAKAGVKCAVFEKELFEREH-VGESLVPATTPVLLEIGVMEKIEKANFPKKFGAAWTSADSGPEDKMGFQGLDHDFRSAEILFNERKQEGVDRDFTFHVDRGKFDRILLEHAGSLGAKVFQGVEIADVEFLSPGNVIVNAKLGKRSVEIKAKMVVDASGRNVLLGRRLGLREKDPVFNQFAIHSWFDNFDRKSATQSPDKVDYIFIHF-----LPMTNTWVWQIPITETITSVGVVTQKQNYTNSDLTYEEFFWEAVKTRENLHDALKASEQVRPFKKEADYSYGMKEVCGDSFVLIGDAARFVDPIFSSGVSVALNSARIASGDIIEAVKNNDFSKSSFTHYEGMIRNGIKNWYEFITLYYRLNILFTAFVQDPRYRLDILQLLQGDVYLEVLDKMREIIAAVESDP---EHLWHKYLG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DBJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179794 for 3372 contacts (-53.3/contact) +
2D Compatibility (PS) -42158 + (NN) -12309 + (LL) 216
1D Compatibility (HY) -17600 + (ID) 4100
Total energy: -255745.0 ( -75.84 by residue)
QMean score : 0.444
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