Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKGAAFDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVGDWPRVRRDIANLGQAAEACR
4FX4 Chain:A ((5-143))
--------ECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGS---DLTMSELAARIGVERTTLTRNLEVMRRDGLVRVMAG----CKRIELTAKGRAALQKAVPLWRGVQAEVTA----WPRVRRDIANLGQAAEAC-
General information:
TITO was launched using:
RESULT:
Template:
4FX4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52253 for 824 contacts (-63.4/contact) +
2D Compatibility (PS) -14115 + (NN) -3647 + (LL) 776
1D Compatibility (HY) -15600 + (ID) 6400
Total energy: -91239.0 ( -110.73 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_4FX4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FX4-query.scw
PDB file :
Tito_Scwrl_4FX4.pdb
: