Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGLISQACGSHRPRRPSSLGAVAILIAATLFATVVAGCGKKPTTASSPSPGSPSPEAQQILQDSSKATKGLHSVHVVVTVNNLSTLPFESVDADVTNQPQGNGQAVGNAKVRMKPNTPVVATEFLVTNKTMYTKRGGDYVSVGPAEKIYDPGIILDKDRGLGAVVGQVQNPTIQGRDAIDGLATVKVSGTIDAAVIDPIVPQLGKGGGRLPITLWIVDTNASTPAPAANLVRMVIDKDQGNVDITLSNWGAPVTIPNPAG
4QA8 Chain:A ((20-229))
---------------------------------------------------GSPSPEAQQILQDSSKATKGLHSVHVVVTVNNLSTLPFESVDADVTNQPQGNGQAVGNAKVRMKPNTPVVATEFLVTNKTMYTKRGGDYVSVGPAEKIYDPGIILDKDRGLGAVVGQVQNPTIQGRDAIDGLATVKVSGTIDAAVIDPIVPQLGKGGGRLPITLWIVDTNASTPAPAANLVRMVIDKDQGNVDITLSNWGAPVTIPNPAG
General information:
TITO was launched using:
RESULT:
Template:
4QA8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118725 for 1647 contacts (-72.1/contact) +
2D Compatibility (PS) -23221 + (NN) -16049 + (LL) 2460
1D Compatibility (HY) -25200 + (ID) 10500
Total energy: -191235.0 ( -116.11 by residue)
QMean score : 0.656
(partial model without unconserved sides chains):
PDB file :
Tito_4QA8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QA8-query.scw
PDB file :
Tito_Scwrl_4QA8.pdb
: