Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTRDLTAAQFNETIQSSD-MVLVDYWASWCGPCRAFAPTFAESSEKHP-DVVHAKVDTEAERELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAGEATTQNGRAQQA
3ZIV Chain:A ((1-103))
-SVIEINDENFDEVIKKSDKVVVVDFWAEWCGPCRMIAPIIEELAEEYAGKVVFGKVNVDENPEIAAKYGIMSIPTLLFFKNGKVVDQLVGARPKEALKERIKK---------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZIV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66329 for 711 contacts (-93.3/contact) +
2D Compatibility (PS) -10779 + (NN) -2010 + (LL) 1904
1D Compatibility (HY) -9600 + (ID) 2100
Total energy: -88914.0 ( -125.05 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_3ZIV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZIV-query.scw
PDB file :
Tito_Scwrl_3ZIV.pdb
: