Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDIPSDLHYTAEHEWIRRSGDDTVRVGITDYAQSALGDVVFVQLPVIGTAVTAGETFGEVESTKSVSDLYAPISGKVSEVNSDLDGTPQLVNSDPYGAGWLLDIQVDSSDVAALESALTTLLDAEAYRGTLTE
3IFT Chain:A ((1-134))
VSDIPSDLHYTAEHEWIRRSGDDTVRVGITDYAQSALGDVVFVQLPVIGTAVTAGETFGEVESTKSVSDLYAPISGKVSEVNSDLDGTPQLVNSDPYGAGWLLDIQVDSSDVAALESALTTLLDAEAYRGTLTE
General information:
TITO was launched using:
RESULT:
Template:
3IFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65867 for 1129 contacts (-58.3/contact) +
2D Compatibility (PS) -14846 + (NN) -10369 + (LL) 0
1D Compatibility (HY) -17200 + (ID) 6650
Total energy: -114932.0 ( -101.80 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_3IFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IFT-query.scw
PDB file :
Tito_Scwrl_3IFT.pdb
: