Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHPLPADHGRSRCNRHPISPLSLIGNASATSGDMSSMTRIAKPLIKSAMAAGLVTASMSLSTAVAHAGPSPNWDAVAQCESGGNWAANTGNGKYGGLQFKPATWAAFGGVGNPAAASREQQIAVANRVLAEQGLDAWPTCGAASGLPIALWSKPAQGIKQIINEIIWAGIQASIPR
4OW1 Chain:W ((1-84))
-------------------------------------------------------------------GPSPNWDAVAQCESGGNWAANTGNGKYGGLQFKPATWAAFGGVGNPAAASREQQIAVANRVLAEQGLDAWPTCGAASGLPIALW-------------------------
General information:
TITO was launched using:
RESULT:
Template:
4OW1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19102 for 615 contacts (-31.1/contact) +
2D Compatibility (PS) -9591 + (NN) -9334 + (LL) 5788
1D Compatibility (HY) -8400 + (ID) 4200
Total energy: -44839.0 ( -72.91 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_4OW1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OW1-query.scw
PDB file :
Tito_Scwrl_4OW1.pdb
: