Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTTVSLADDVAAAVQRLRKERSIGLSEAVNELIRAGLTKRQVANRFQQQTYD---MGEGIDYSNIGDAIETL-DGPASG
1V38 Chain:A ((1-78))
GSSGSSGRRENHQTIQEFLE--RIHLQEYTSTLLLNGYETLDDLKDIKESHLIELNIADPEDRARLLSAAESLLSGPSSG
General information:
TITO was launched using:
RESULT:
Template:
1V38.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21379 for 465 contacts (-46.0/contact) +
2D Compatibility (PS) -7491 + (NN) -374 + (LL) 204
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -30990.0 ( -66.65 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_1V38.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V38-query.scw
PDB file :
Tito_Scwrl_1V38.pdb
: