Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDSIMGSPDGEH |
| 1BGY Chain:C ((1-379)) | MTNIRKSHPLMKIVNNA--------------FIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTS-----------------DTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTF--LETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSA-IPYIGTNLVEWIWGGFSVDKATLTRFFAFH-FILPFIIMAIAMVHLLFLHETGSNNPTGISSDVDKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDP-DNYTPANPLNTPPHIKPEWYFLFAYAILR------------SIPNKLGGVLALAFSILILALIPLL----------HTSKQRS-------------------MMFRPLSQCLFWALVADLLTLTWIGG----------------------------QPVEHPYITIGQLASVLYFLLILV-------------------------------------LMPTAGTIENKLLKW---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237370 for 2918 contacts (-81.3/contact) +
2D Compatibility (PS) -39711 + (NN) -23081 + (LL) 9520
1D Compatibility (HY) -28000 + (ID) 3900
Total energy: -322542.0 ( -110.54 by residue)
QMean score : 0.268
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