Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTDHRAAQVGTEHLAADLLVALDRNHARLLRQLGVEAARVRMLRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESALPGLHDWVDERLARNGPS
1U2Q Chain:A ((4-158))
---PLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTDHRAAQVGTEHLAADLLVALDRNHARLLRQLGVEAARVRMLRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESALPGLHDWVDERLA-----
General information:
TITO was launched using:
RESULT:
Template:
1U2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120764 for 1314 contacts (-91.9/contact) +
2D Compatibility (PS) -16909 + (NN) -9182 + (LL) -216
1D Compatibility (HY) -19200 + (ID) 7750
Total energy: -174021.0 ( -132.44 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_1U2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U2Q-query.scw
PDB file :
Tito_Scwrl_1U2Q.pdb
: