Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLRKNVIRSVLRGARPLFASRRLGIAGRRVLLATLTAGARAPKGTRFQRVSIAGVPVQRVQPPHAATSGTLIYLHGGAYALGSARGYRGLAAQLAAAAGMTALVPDYTRAPHAHYPVALEEMAAVYTRLLDDGLDPKTTVIAGDSAGGGLTLALAMALRDRGIQAPAALGLICPWADLAVDIEATRP-ALRDPLILPSMCTEWAPRYVGSSDPRLPGISPVYGDMSGLPPIVMQTAGDDPICVDADKIETACAAS--KTSIE-HRRFAGMWHDFHLQVSLLPEARDAIADLGARLRGHLHQSQGQPRGVVK |
| 3H1A Chain:A ((39-292)) | ----------------------------------------KAADDIQVEQVTVAGCAAEWVRAPGCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTRAEADPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVLLDDSIKLDAKAKADGVKSTLEIWDDMIHVWHAFH---PMLPEGKQAIVRVGEFMR--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171500 for 2310 contacts (-74.2/contact) +
2D Compatibility (PS) -27326 + (NN) -18220 + (LL) 4320
1D Compatibility (HY) -14800 + (ID) 4250
Total energy: -231776.0 ( -100.34 by residue)
QMean score : 0.665
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