Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSADSNSTDADPTAHWSFETKQIHAGQHPDPTTNARALPIYATTSYTFDDTAHAAALFGLEIPGNIYTRIGNPTTDVVEQRIAALEGGVAALFLSSGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYSLAKLGIEVSFVDDPDDLDTWQAAVRPNTKAFFAETISNPQIDLLDTPAVSEVAHRNGVPLIVDNTIATPYLIQPLAQGADIVVHSATKYLGGHGAAIAGVIVDGGNFDWTQGRFPGFTTPDPSYHGVVFAELGPPAFALKARVQLLRDYGSAASPFNAFLVAQGLETLSLRIERHVANAQRVAEFLAARDDVLSVNYAGLPSSPWHERAKRLAPKGTGAVLSFELAGGIEAGKAFVNALKLHSHVANIGDVRSLVIHPASTTHAQLSPAEQLATGVSPGLVRLAVGIEGIDDILADLELGFAAARRFSADPQSVAAF
4KAM Chain:C ((16-444))-----------PTAHWSFETKQIHAGQQPDSAT----LPIYQTTS-----------------------RLGNPTTDVVEQRIAALEGGVAALFLSSGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYSLAKLGIEVSFVDDPDNLDSWQAAVRPNTKAFFGETISNPQIDLLDTPGVAEVAHRNGIPLIVDNTIATPYLIRPFTQGADIVVHSATKYLGGHGAAIAGVIVDGGTFDWTQGRFPEFTTPDPSYHGVVFAELGAPAYALKARVQLLRDLGSAASPFNAFLVAQGLETLSLRIERHVSNAQRVAEFLADREDVVTVNYAGLPGSPWHERAKKLSPKGTGAVLSFELAGGVEAGKAFVNALKLHSHVANIGDVRSLVIH-------------------SPGLVRLAVGIEGIEDILADLELGFAAARKFS---------


General information:
TITO was launched using:
RESULT:

Template: 4KAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -243106 for 3441 contacts (-70.6/contact) +
2D Compatibility (PS) -42123 + (NN) -29381 + (LL) 3624
1D Compatibility (HY) -49200 + (ID) 17650
Total energy: -377836.0 ( -109.80 by residue)
QMean score : 0.560

(partial model without unconserved sides chains):
PDB file : Tito_4KAM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KAM-query.scw
PDB file : Tito_Scwrl_4KAM.pdb: