Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALKHSEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFGRITL----GEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDC--RRLQDSFAAVDFFEH---------RNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALATLSPAGG
3T1O Chain:A ((4-195))
--STINFANREINFKIVYYGPGLSGKTTNLKWIYSKVP----------EGRKGEMVSLATEDERTLFFDFLPLDIGEVKGFKTRFHLYTVPGQVFYNASRKLILRGVDGIVFVADSAPNRLRANAESMRNMRENLAEYGLTLDDVPIVIQVNKRDLPDALPVEMVRAVVDPEGKFPVLEAVATEGKGVFETLKEVSRLVLARVA----
General information:
TITO was launched using:
RESULT:
Template:
3T1O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134878 for 1423 contacts (-94.8/contact) +
2D Compatibility (PS) -18917 + (NN) -3848 + (LL) 1108
1D Compatibility (HY) -7600 + (ID) 2050
Total energy: -166185.0 ( -116.78 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_3T1O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T1O-query.scw
PDB file :
Tito_Scwrl_3T1O.pdb
: