Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG
3Q7U Chain:B ((6-231))
-----GEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG
General information:
TITO was launched using:
RESULT:
Template:
3Q7U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169166 for 1848 contacts (-91.5/contact) +
2D Compatibility (PS) -25623 + (NN) -18533 + (LL) 748
1D Compatibility (HY) -30800 + (ID) 11300
Total energy: -254674.0 ( -137.81 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_3Q7U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q7U-query.scw
PDB file :
Tito_Scwrl_3Q7U.pdb
: