Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHPIPSPGAALQRRQALRSFLGVTPALVAIGLFLVLPILIVAAYSLMEANPYGGVDRAFSGEAYVSLLFERQMDDSLAFADSYLTIALRSLGIAALTTLITLSLGFPVAVWLAMQPPRRRGLLIFLITVPFWANLLIRTYAWILLLRGSGVINNGLLGLGLVDHPLPLLYSDGAVLLGLVYTYAPFVVLPIYATLEKMDMRLLEAAQDLYAGRLRTLRKVVLPTARPGILAGAILTFVPCLGAMIAPELLGGGTRMMLGNLIFRQFADARNWPFGAALSLVLMAAVMLILTVYAWRAERLARGMGR
3D31 Chain:C ((45-283))
--------------------------LLVLFLFIFLTLSNMIFEQITE-----------DFSGLVKAAG----------NRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPGKRLVESIIDVPVVVPHTVAGIALLTVFGSRGLIGEPLESY------IQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYY-PMVGPTLIYDRFI-SYGLSASRPIAVLLILVTLSIFLVIR------------
General information:
TITO was launched using:
RESULT:
Template:
3D31.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -247212 for 1854 contacts (-133.3/contact) +
2D Compatibility (PS) -25065 + (NN) -11473 + (LL) 3472
1D Compatibility (HY) -20000 + (ID) 2450
Total energy: -302728.0 ( -163.28 by residue)
QMean score : 0.284
(partial model without unconserved sides chains):
PDB file :
Tito_3D31.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D31-query.scw
PDB file :
Tito_Scwrl_3D31.pdb
: