Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIYGVALLSLCTLAGLFIGEILGVLLGVPANVGGVGIAMLLLIFVGSYLGKRGLLSAKTEQGVEFWSAVYIPIVVAMAAQQNVLGALSGGPAAILAGIAAVAVAFALVPLLDRFGRKKAEGARPLKPRTSVQG
2Q74 Chain:A ((192-282))
-------------------AELLAHVVPLVRDVRRIGSAALDLCMVAA-----GRLDAYYEHGVQVWDCAAGALIAAEAGARVLLS------AGLVVVAAAPGIADELLAALQRFNGLE---------------
General information:
TITO was launched using:
RESULT:
Template:
2Q74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71260 for 593 contacts (-120.2/contact) +
2D Compatibility (PS) -8673 + (NN) 717 + (LL) 2696
1D Compatibility (HY) -5200 + (ID) 1300
Total energy: -83020.0 ( -140.00 by residue)
QMean score : 0.101
(partial model without unconserved sides chains):
PDB file :
Tito_2Q74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q74-query.scw
PDB file :
Tito_Scwrl_2Q74.pdb
: