Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEIKSRLLDAVKVAMRAQDKPRLTTLRLALADIKRVEVDER-IEVDDARALLILDRMIKQRRDAQRQFSDAGRQDLAEVEAAEILVLQDFMPKPLDDHEIDALIERSIVDSGAQGPQDMGKAMNLLRPQVQGRVDMAQVSQRLKARLSS
1NG6 Chain:A ((1-148))
MS-LLERLNQDMKLYMKNREKDKLTVVRMVKASLQNEAIKLKKDSLTEDEELTVLSRELKQRKDSLQEFSNANRLDLVDKVQKELDILEVYLPEQLSEEELRTIVNETIAEVGASSKADMGKVMGAIMPKVKGKADGSLINKLVSSQLS-
General information:
TITO was launched using:
RESULT:
Template:
1NG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41538 for 993 contacts (-41.8/contact) +
2D Compatibility (PS) -16660 + (NN) -16203 + (LL) 76
1D Compatibility (HY) -9200 + (ID) 2150
Total energy: -85675.0 ( -86.28 by residue)
QMean score : 0.683
(partial model without unconserved sides chains):
PDB file :
Tito_1NG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NG6-query.scw
PDB file :
Tito_Scwrl_1NG6.pdb
: