Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTIDYNSYRTTTPYGKRVRFLVLHYTALDFAASVKALTTGAASAHYLIPAPHDPSYKAAGFKGQRIFNLVAEEDRAWHAGVSGWARRDNLNDTSIGIEIVNLARDDDGVFTFPDYERSQINALKQLAKNILQRYPDMTPKNVVGHSDIAVGRKSDPGPKLPWKELYEAGIGAWYDDATRDRYREGFERDGLPPRADLLEAFRLYGYALPATVDDAYFASLLRAFQMHFRPENYDGALDVETAAILYALNEKYPA
4BXJ Chain:A ((1-255))
MLTIDYNSYRTTTPYGKRVRFLVLHYTALDFAASVKALTTGAASAHYLIPAPHDPSYKAAGFKGQRIFNLVAEEDRAWHAGVSGWARRDNLNDTSIGIEIVNLARDDD-VFTFPDYERSQINALKQLAKNILQRYPDMTPKNVVGHSDIAVGRKSDPGPKLPWKELYEAGIGAWYDDATRDRYREGFERDGLPPRADLLEAFRLYGYALPATVDDAYFASLLRAFQMHFRPENYDGALDVETAAILYALNEKYPA
General information:
TITO was launched using:
RESULT:
Template:
4BXJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123167 for 1997 contacts (-61.7/contact) +
2D Compatibility (PS) -28353 + (NN) -24381 + (LL) -172
1D Compatibility (HY) -32800 + (ID) 12700
Total energy: -221573.0 ( -110.95 by residue)
QMean score : 0.678
(partial model without unconserved sides chains):
PDB file :
Tito_4BXJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BXJ-query.scw
PDB file :
Tito_Scwrl_4BXJ.pdb
: