Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQRQIFETEHNLFRDAFRAFLDKEVVPHQDAWEEAGVVDRAVWRKAGEMGFLLPWADEEYGGAGLKDFRYEQIMCEELARINEPGF-MIPLHSALCGPYIAEYGSAEQKARLLPGIVRGETILAVAMTEPSAGSDLAGMRSTAVDKGDHWLLNGSKVFISNGLLADLVIVAAKTDPA--N-KHAMGLFLVERGMQGFERGRNLKKLGMKSQDTAELFFNNVRVPKENLLGDAKGGFFYLMNMLAQERLTNACGAVAGAEAALQATIDYVKERQAFGRPVAHFQNTRFKLAEMRTQIDVAQVFTDRCVMD-HNQKKLSPEVAAEAKLFTTELLGKVVDEGVQLHGGWGYMWEYPICRMYANARIQRIFAGTSEIMKEIISRGMKL |
| 2PG0 Chain:A ((6-385)) | -TARYLREEHHMFRAAFRKFLEKEAYPHYNDWEKRGIIPRSFWAKMGENGFLCPWVDEKYGGLNADFA-YSVVINEELEKV-GSSLVGIGLHNDIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGSDLANISTTAVKDGDYYIVNGQKTFITNGIHADLIVVACKTDPQAKPPHRGISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVI-EEHMAGKQIVTEVSMAKWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMMKTIIARQLDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206694 for 3185 contacts (-64.9/contact) +
2D Compatibility (PS) -39487 + (NN) -11534 + (LL) 436
1D Compatibility (HY) -34800 + (ID) 8950
Total energy: -301029.0 ( -94.51 by residue)
QMean score : 0.494
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