Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLLRTISVETAEQTELNAALLCGFAIPASDRNFIAYSLNEQVDENDSRVYIASLFKTDDGFRLGRLDTDEACEAAIQVFRQLVREATTGNRRTSDLAYHLIDLQDAAIAPSRREEHRSLVLEREWVMKLVTFESPHGYGPALDGEEPCAEVPPLVQEALFEDAAPDVLAEDDADETTDGPAEPIDEPEAAEDETVTEAGCVEPEPRPEAETAAPEGGAPAEFAAKAEQSAKVADAEAIGAFVDNASHLREELADLAQMLHPALHAADATGSANLPSPDAAEESSMPPSPSPLAAPAPEPVSARVPSLSLRLRVPPARLAGAEGGANAREAPTQAAAVIRQPEDEAHVDTDTALDIGNDTEHLLQDVQGTLADLAGMAQQLSQQKQEALKQQESLESLQTQLHEKERQLQEKEKQLRQWHKRLQDDRQALERETEQSNRLLAE-----RSAALQQLA--ESVEARERSSARRAEVLQIEQERLEELRSQQNLRQAELEKREASVQQRSLELGERFKKLESAREKLAQIVKGFNETVQFNTALHAISHTGLKRQEESAAELE
3VKG Chain:A ((1933-2076))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDVRNKEIAVQKVKAYADL-------PLREEVEQLENAA-NELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQQSENFNTQMS


General information:
TITO was launched using:
RESULT:

Template: 3VKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 42750 for 711 contacts (60.1/contact) +
2D Compatibility (PS) -15671 + (NN) -16627 + (LL) 25848
1D Compatibility (HY) -3600 + (ID) 1500
Total energy: 31200.0 ( 43.88 by residue)
QMean score : 0.662

(partial model without unconserved sides chains):
PDB file : Tito_3VKG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VKG-query.scw
PDB file : Tito_Scwrl_3VKG.pdb: