Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLHGKTLFITGASRGIGREIALRAARDGANLVIAAKSAEPHPKLEGTIFSVAAEVEAAGGQALPLQLDVRDEQAVAAAMARAAERFGGIDALVNNAGAIRLVGVEKLEPKRFDLMYQINTRAVLVCSQAALPYLRRSANGHILSLSPPINLAGRWFAQHGPYTVTKYGMSMLTLGMHEEFGKYAISVNALWPKTMIATAAIEFELGSRDAFRRARTPAIMADAAHAILTSEGRSLSGRLLVDEELLRERGQSDFEQYRYDPEGGALVPDLFLD |
| 3KVO Chain:A ((43-310)) | --LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEF-KGEIAVNALWPKTAIHTAAMDM-LG--GIESQCRKVDIIADAAYSIF-QKPKSFTGNFVIDENILKEEGIENFDVYAIKP-GHPLQPDFFLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150743 for 2305 contacts (-65.4/contact) +
2D Compatibility (PS) -28869 + (NN) -9783 + (LL) 340
1D Compatibility (HY) -26800 + (ID) 7350
Total energy: -223205.0 ( -96.84 by residue)
QMean score : 0.623
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