Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNPERSALLKVSGLLGSTVVAMGLGLSSACAQKNPTVEYNQPAAPLQTKAPFSGAGPAASVPAGAPNEAQPGQSFEQWRDAFRQQALAGGIDAQTFDRAFAGVQPDPAVVEADRSQPEFT---RPVWKYLEGALDPLRVRQGQARLAQHARILGEVDARYAVDADAVVAIWGMESNYGSHMGNKNVIRSLATLAYEGR-RPEFAHAQLLAALKILQHGDVPASFMIGSWAGAMGQTQFIPTTHNQYAVDFDGDGKRDIWGSPGDALASTANYLKASGWIAGQPW-----GFEVRLPAGFDYSLAELTIRKPLGEWQGMGVQGVNGGPLPSGLSGEQASLLLPAGH-RGPAFLVLHNFRAILKYNNSSAYALAVGLLADSFKGGGRIVGAWPLEDVPLSRSQRIELQRQLAARGHDPGAVDGIIGANTRKAIRACQQEFGWPADGYPTPALLDRLRTP |
| 1QUS Chain:A ((16-318)) | ----------------------------------------------------------------------ANNPNAQQFIDKM---VNKHGFDRQQLQEILSQAKRLDSVLRLMDNQ----GPNGAWLRYRKKFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIGVETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFAGAMGYGQFMPSSYKQYAVDFSGDGHINLWD-PVDAIGSVANYFKAHGWVKGDQVAVMANGQAPGLPNGFK-------TKYSISQLAAAGLTPQQP--LGN---HQQASLLRLDVGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQLGQAVAL--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QUS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135922 for 2313 contacts (-58.8/contact) +
2D Compatibility (PS) -30691 + (NN) -15146 + (LL) 7728
1D Compatibility (HY) -18400 + (ID) 4300
Total energy: -196731.0 ( -85.05 by residue)
QMean score : 0.546
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