Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MPEYNAPL-----RDMRFLLNDVFDAPALWQRLPRLAERIDADTADAILEEAAKVTGGLLAPLNRSGDEEGAQWQD--------GAVRTPAGFREAYATYAEGGWVGLTGNPAHGGMGMPKMLAVQFEEMMYAANASFSLYST---LSAGACLALDA---HGSEELKNRYLPNMY----AGTWAGSMCLTEPHAGTDLGI-IRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPD----APAGSRGISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKGLAAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVARDKAADPIIVHPDVRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDTGLESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANGGLFLSIFSREVRAFAAGANAELAEFVTPLLTALDLLDNLTQGIVARAGNDPREIGAASVEYLHLFGYTAYAYLWARMAAAAQRQREVDPAFHDGKLATARFYFARILPRVHSLAAAVEAGSESLYGLEAEQF |
| 4Y9J Chain:A ((1-592)) | TITARHTQYSHAKTGGFSQTGPTLHNPYKDDPILDRTLRRLLPESEYMRVAADLSKFGDRITSEVEHLGRQAELEQPRLEHQDAWGKRVDKLIVCNEWHKLKQICAEEGVI----SIGYEDSVDPFVRRIHQVAKLFLFSPSAGLVSCPMAMTDGAVKTLTSLNLYGKHKLATEAVDRLRSRDPSKAWTSGQWMTEKKGGSDVAGGCDTYAVQIDKDTYRLHGYKWFSSAVDAD-----VALTLARIVDSDGNALEGSRGLSLFLLK---IRDES--GNLNGIQMVRLKNKLGTKQLPTAELLLDGAIAERIGDQGRGVAGISNMLNITRIHNAVASLGYMRRIISLARDYSTKRVV----FGQTQSK--------WPLHTTTLAKMEVDTRGSMLLLFEAARLLGLSEAGKSS---DVEAMMLRLITPVLKLYAGKQAVPMVSEGIECFGGQGYMEDTGLPTLLRDAQVTPIWEGTTNVLSLDVL--RVFSGKENILLAFGKRVEQLLGNTKTEDEKLKKSKEAVESALKQLQKLLVKASDSAIQGETRIDSVARHIAFTIARIYSGALLIDHASDSSVAN---QSDIEVAYRYCCEQPLIDLRWEWFASERVKADREIVFDNFT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Y9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228065 for 4841 contacts (-47.1/contact) +
2D Compatibility (PS) -59575 + (NN) -15590 + (LL) 2216
1D Compatibility (HY) -15600 + (ID) 5900
Total energy: -322514.0 ( -66.62 by residue)
QMean score : 0.335
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