Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVWFQLHWFFGISAGLVLALMGVTGATLSFQDELMRALNPDVLVVQKRPEGVLPLDELVRRIEGAEPGRKVAFVWVEMDSDKAGRIFYTPPPGQRRGESRWIDPYTGAFVGEPRGEGFFNLMMQLHRFLAMGEYGKQVTAACTLILIFFCLSGLYLRWPRKVFDWRAWLTLDWSRKGRSFNWDLHAVAGTWCLALYLLAALTGLYWSYEWYRNGLFKLLDDAPAGQQAQRGKPGGRGERPADAAPLVVDYAAVWNSIRQAGGDRLQAYNLRLPPAGGQPATVFYRLTDAPHERAFNTLTLDPANGQVKSDQRYSDRSFGSQLLASVYALHVGSYFGMAGRILMMLASLAMPLFFITGWLLYLDRRRKKRAVRASRADLGGSAGASGEPWLIGYASQSGFAEQLAWQSAGQLQA-AGLPVRVESLARLDAGQLAEARK-ALFVVSTFGDGEAPDSARGFERKVLGQA-ASLDGLSYALLALGDRQYEQFCGFARRMQGWLQGQGARSLFAPVEVDDGD---AAALRQWQESLAEVTGGAAPA---------A--W----------E---------------------------APAFEVWSLARRECLNPGSQGESTWLLDLRAPANSAIQWRAGDLLEIVPHQAPVRIREWLQRHNLDGQARVAVE----------GVEQSLEQALAGR-LL---PD----------------------S------------------F----EH-L----VGLHPQALLDALIPLSVRQYSIASLQSD--GDLQLIVRQEQH-------ADGSLGICSGWLTEYLPLGA------------ALTLRLRR-------------NAGFHLP-EDDVPLILIGNGTGLAGLRSLLRASIAA-------GRKRNWLLFGERNFAHDYYCRAELEQALARG-ELQRLDLAFSRDQ-AEKIYVQDRLHEAADELRRWIDEGAALYVCGSL-QGMAGGVDRVLREVLGEE----------ALQRLADEGRYRRDVY |
| 2BPO Chain:A ((45-682)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTENNKNYLVLYASQTGTAEGFAKAFSKELVAKFNLNVMCADVENYDFESLNDVPVIVSIFISTYGEGDFPDGAVNFEDFICNAEAGALSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAAGAIRLGKLGEADDGAGTTDEDYMAWKDSILEVLKDELHLDEQEAKFTSQFQYTVLNEITDSMSLGEPSAHYLPSHQLNRNADGIQLGPFDLSQPYIAPIVKSRELFSS-NDRNCIHSEFDLSGS-NIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLKPLDPTVKVPFPTPTTIGAAIKHYLEITGPVSRQLFSSLIQFAPNADVKEKLTLLSKDKDQFAVEITSKYFNIADALKYLSDGAKWDTVPMQFLVESVPQMTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRN-IQLAQNNVNIAETNLPVHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKNVSLGKHILFYGSRNT-DDFLYQDEWPEYAKKLDGSFEMVVAHSRLPNTKKVYVQDKLKDYEDQVFEMINNGAFIYVCGDAKG-MAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQEDVW |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240790 for 3708 contacts (-64.9/contact) +
2D Compatibility (PS) -49809 + (NN) -15501 + (LL) 25768
1D Compatibility (HY) -30400 + (ID) 6000
Total energy: -316732.0 ( -85.42 by residue)
QMean score : 0.511
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