Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNLTLADLQGEIQANVRTALAEDVGG-----GDLTAQLIDPQREAEARVITREHATIAGRAWVDEVFRQVDPRVLVTWQVEDGQRVEPNQMLFQLKGPARALLTGERSALNFLQLLSGTATRSQHYADLVAGTAVKLLDTRKTLPGLRLAQKYAVTCGGCHNHRIGLYDAFLIKENHIAACGGIDRAIAEARRIAPGKPVEVEVENLDELRQALEAGADIVMLDELSLDDMRTAVALTAGRAKLEASGGINEGTLRNIAETGVDYISIGTLTKDVRAVDLSMRLTL |
3PAJ Chain:A ((14-295)) | ----LKQQLPADITRSVIDTLKEDLGGTLDPAADITASLIPADRISTATIITREAGVFCGQLWADEVFKQLGGQVSIEWHVQDGDTLTPNQTLCTLTGPARILLTGERNAMNFIQTLSGCATATARYVQELKGTQCRLLDTRKTIPGLRSALKYAVACGGGYNHRIGVFDAYLIKENHIIACGGIRQAISTAKQLNPGKPVEVETETLAELEEAISAGADIIMLDNFSLEMMREAVKINAGRAALENSGNITLDNLKECAETGVDYISVGALTKHLKALDLSMRFK- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -159651 for 2276 contacts (-70.1/contact) +
2D Compatibility (PS) -30837 + (NN) -9831 + (LL) 340
1D Compatibility (HY) -27600 + (ID) 7750
Total energy: -235329.0 ( -103.40 by residue)
QMean score : 0.581
|
|
|