Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------MNFENSVSPG----VSAFVAKMRVRAAQSPGAILPGHGHPASLAWRVDPAGGRLEYRR-----------LETQVEENPESGRRPMRG----
2WBX Chain:A ((1-102))
MQVNRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGD
General information:
TITO was launched using:
RESULT:
Template:
2WBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6590 for 444 contacts (-14.8/contact) +
2D Compatibility (PS) -7114 + (NN) 4756 + (LL) 0
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -13648.0 ( -30.74 by residue)
QMean score : 0.114
(partial model without unconserved sides chains):
PDB file :
Tito_2WBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WBX-query.scw
PDB file :
Tito_Scwrl_2WBX.pdb
: