Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTNPFISLFGRSPIGPMQQHIAKAHECAAGLLPFFRAVIAEDWAQVEQVQQDMVRLEQEADRLKKHVRMHLPKSLFLPVPRSDLLELLSVQDKVANRAKDIAGLMLGRRMRIPLPLQGQMLAYVQRSVDASAQALRVVNELNELLETGFGGRETSLVESMVEELEAIENDTDRIQVEVRRELFRLESELPPVDVMFLYQIIEWIGDVADRAQRVGNRLEQLLAR
2OLT Chain:A ((14-226))
------------SPIKPLQEHMDKVYDCASLLVPFFEATITGNWDDAVQIRKQISLAEKQGDSLKREIRLTLPSGLFMPVERTDLLELLTQQDKIANKAKDISGRVIGRQLLIPQALQVPFIAYLQRCIDAVGLAQQVINELDDLLEAGFRGREVDFVAKMINELDIIEEDTDDLQIQLRRQLFALESELNPVDVMFLYKTIEWVGGLADLAERVGSRLELMLAR
General information:
TITO was launched using:
RESULT:
Template:
2OLT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121838 for 1655 contacts (-73.6/contact) +
2D Compatibility (PS) -23703 + (NN) -17655 + (LL) 444
1D Compatibility (HY) -24000 + (ID) 5600
Total energy: -192352.0 ( -116.22 by residue)
QMean score : 0.684
(partial model without unconserved sides chains):
PDB file :
Tito_2OLT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OLT-query.scw
PDB file :
Tito_Scwrl_2OLT.pdb
: