Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTRVYERA
3P6C Chain:A ((8-139))
MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTRVYERA
General information:
TITO was launched using:
RESULT:
Template:
3P6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41671 for 943 contacts (-44.2/contact) +
2D Compatibility (PS) -14744 + (NN) -3346 + (LL) 0
1D Compatibility (HY) -18800 + (ID) 6600
Total energy: -85161.0 ( -90.31 by residue)
QMean score : 0.684
(partial model without unconserved sides chains):
PDB file :
Tito_3P6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P6C-query.scw
PDB file :
Tito_Scwrl_3P6C.pdb
: