Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKIGESFEEETVDGRKCRSLATWENENKIYCKQTLIEGDGPKTYWTRELANDELILTFGADDVVCTRIYVRE
2CBR Chain:A ((1-136))
-PNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGEGFEEETVDGRKCRSLPTWENENKIHCTQTLLEGDGPKTYWTRELANDELILTFGADDVVCTRIYVRE
General information:
TITO was launched using:
RESULT:
Template:
2CBR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43493 for 996 contacts (-43.7/contact) +
2D Compatibility (PS) -15465 + (NN) -9521 + (LL) 208
1D Compatibility (HY) -16800 + (ID) 6500
Total energy: -91571.0 ( -91.94 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_2CBR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CBR-query.scw
PDB file :
Tito_Scwrl_2CBR.pdb
: