Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKSCLLL
3KUC Chain:A ((1-167))
MREYKLVVLGSGGVGKSALTVQFVQGIFVDEYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINR-----------------
General information:
TITO was launched using:
RESULT:
Template:
3KUC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105356 for 1355 contacts (-77.8/contact) +
2D Compatibility (PS) -17798 + (NN) -2855 + (LL) 1072
1D Compatibility (HY) -25600 + (ID) 8250
Total energy: -158787.0 ( -117.19 by residue)
QMean score : 0.712
(partial model without unconserved sides chains):
PDB file :
Tito_3KUC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KUC-query.scw
PDB file :
Tito_Scwrl_3KUC.pdb
: