Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSSDDGTQGCMGLPCVVM
4LUC Chain:B ((2-169))
MTEYKLVVVGACGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETSLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKSDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHKE---------------------
General information:
TITO was launched using:
RESULT:
Template:
4LUC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110010 for 1350 contacts (-81.5/contact) +
2D Compatibility (PS) -18902 + (NN) -9219 + (LL) 620
1D Compatibility (HY) -20400 + (ID) 7500
Total energy: -165411.0 ( -122.53 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_4LUC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LUC-query.scw
PDB file :
Tito_Scwrl_4LUC.pdb
: